Malva Client¶
Python client for the Malva genomic search platform, enabling programmatic access to harmonized single-cell and spatial transcriptomics data.
Install the package and configure authentication in under a minute.
Search for genes, sequences, and biological signatures with just a few lines of code.
Step-by-step Jupyter notebooks for expression analysis, coverage, and more.
Tune window size, threshold, and strandedness for your specific use case.
Full reference for all classes, methods, and CLI commands.
Platform overview, data sources, use cases, and contact information.
Key Features¶
Search – Gene symbols, natural language, DNA sequences, and batch queries.
Coverage – Genomic region and sequence coverage across cell types, filterable by organ, study, and disease.
Coexpression – Gene coexpression analysis, metacell UMAP visualization, and GO enrichment.
Dataset Discovery – Browse datasets, studies, samples, and harmonized metadata.